Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme196880g00001 CGAATGGACAACGAGTATTTAAGATCTGCACTTGATTTTCTTGAGCTACAACCTGATTTAAAAGCTCTTGTTCGCGGTGCGCATACTTTCAAGTGCCCGAATCTTGGTATTACTAGTTGGGCTAGGCTTCCGATTCACGATGCTGATTTTGGTTGGGGAAGGCCTATTTTCATGGGACCAGGTGGAATTGCTTATGAAGGTTTGTCTTTCATAATTCCAAGCTCAACAAATGATGGAAGTTTATCTGTGGCAATTGCTCTTCAGCATGAGCATATGAAAGTGTTTAAGGAATTCTTGTATGATATCTGA 309 0.4078 RMDNEYLRSALDFLELQPDLKALVRGAHTFKCPNLGITSWARLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSLSVAIALQHEHMKVFKEFLYDI 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme196880g00001 102 Pfam Transferase family 2 98 - -
Trme196880g00001 102 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 100 - -
Trme196880g00001 102 Gene3D - 1 102 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme196880g00001 Trme-Chr196880 138 446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme196880g00001 1 102 Monolignol Biosynthesis Gene Families AT5G48930 82.353 9.63e-60 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme196880g00001 K13065 - gmx:100820075 204.142