Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme196861g00001 TTGCAGGATTCAAAAGAGTTGGAGTTTTTCACCGAGTATGGGGAAGCCAACAGATACAAGATTATTGAGATTATTGGAAAGGGTAGTTATGGAGTTGTTTGTGCGGCAATTGACACGCACACCGGGGAAAAGGTCGCAATAAAGAAGATTCATGATGCCTTTGAGCATATCTCTGATGCCGTTAGAATCCTCCGTGAAGTTAAGTTGCTAAGACTTTTAAGACACCCTGATATTGTTGATATTAAGAGGATTATGTTGCCGCCTTCAAAGAGAGAGTTTAAAGATATTTATGTGGTCTTTGAGCTCATGGAGTCTGATCTCCATCAAGTCATCAAAGCTAATGATGACTTAACCCGTGATCACCATCAGTTTTTTCTTTATCAGATGCTACGTGCGTTAAAGTATATGCATTCGG 415 0.4 MQDSKELEFFTEYGEANRYKIIEIIGKGSYGVVCAAIDTHTGEKVAIKKIHDAFEHISDAVRILREVKLLRLLRHPDIVDIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTRDHHQFFLYQMLRALKYMHS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme196861g00001 138 Gene3D Phosphorylase Kinase; domain 1 16 104 - -
Trme196861g00001 138 ProSitePatterns Protein kinases ATP-binding region signature. 25 49 IPR017441 GO:0005524
Trme196861g00001 138 Gene3D Transferase(Phosphotransferase) domain 1 105 138 - -
Trme196861g00001 138 ProSiteProfiles Protein kinase domain profile. 19 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme196861g00001 138 Pfam Protein kinase domain 19 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme196861g00001 138 SUPERFAMILY Protein kinase-like (PK-like) 13 138 IPR011009 -
Trme196861g00001 138 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 18 138 - -
Trme196861g00001 138 SMART serkin_6 19 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme196861g00001 138 FunFam Mitogen-activated protein kinase 8 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme196861g00001 Trme-Chr196861 1 415 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme196861g00001 4 138 MAP Kinase Gene Family AT1G53510 89.630 5.89e-87 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Trme196861g00001 Pkinase 9.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme196861g00001 - - fve:101294541 263.077