Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme196685g00001 ATTGATCGGCAACTTGCTTTGGACAAATCCACAAGTCCTTTTATAGATGGTTTCGTTTCAAATGGTGACAAGTTTATGAAGAGTTTTGGAAGTGCTATGATTAAGATGGGAGAAGTTGGAGTTTTGGTTGGGAAGGAAGGAAAAATTCGGAAGAACTGCAAGGTGTTCAACAAAGTCAGTTAG 183 0.388 IDRQLALDKSTSPFIDGFVSNGDKFMKSFGSAMIKMGEVGVLVGKEGKIRKNCKVFNKVS 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme196685g00001 60 Gene3D - 37 57 - -
Trme196685g00001 60 SUPERFAMILY Heme-dependent peroxidases 2 57 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme196685g00001 60 Gene3D Peroxidase, domain 2 1 36 - -
Trme196685g00001 60 ProSiteProfiles Plant heme peroxidase family profile. 1 57 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme196685g00001 Trme-Chr196685 151 333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme196685g00001 1 57 Peroxidase AT4G26010 49.123 1.55e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme196685g00001 K00430 - cave:132162093 71.6329