Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme196608g00001 ATGGATAAGCTAATGTCTTCTCCACCACAACAGGCAGGTTTCTCTTGTGGTTTGGACTCAAGAGAGAGTGTTTTCATGAAGCCGAGAGTTTATGTAAATCATGCAAATGGGTTGGATGACATGAAAGATAGTCCTGAGAATACTGAATCCGTCGGTGTAGAAAGTTCAGATGGACCTCGCACAAAGAAAAGAAGGAAGGGAAAGAGCGATGATAACGATTCTTCTTTCAAATTACTTGCTGATTCCATTCAGAATTTTGGTAAGATATATGAGAAGATTGAAAATAGTAAAAGGCAGCAGATGCTGGAACTGGAAAAGATGAGGATGGAATTTCTCAATGATTTGGAAATACAAAAGAGACAGATTTTTGAAAAATTGCAGAGTGAGATTTTGAAACTAGAGCAAAGAGATGATTAG 417 0.3765 MDKLMSSPPQQAGFSCGLDSRESVFMKPRVYVNHANGLDDMKDSPENTESVGVESSDGPRTKKRRKGKSDDNDSSFKLLADSIQNFGKIYEKIENSKRQQMLELEKMRMEFLNDLEIQKRQIFEKLQSEILKLEQRDD 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme196608g00001 138 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 136 IPR044823 -
Trme196608g00001 138 Coils Coil 90 110 - -
Trme196608g00001 138 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Trme196608g00001 138 MobiDBLite consensus disorder prediction 56 75 - -
Trme196608g00001 138 MobiDBLite consensus disorder prediction 35 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme196608g00001 Trme-Chr196608 31 447 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme196608g00001 60 135 Trihelix Transcription Factor Family AT3G14180 42.105 1.21e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme196608g00001 - - psat:127087507 224.557