Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19609g00001 GGTTATGGTACGCTTCTTATGGAGGAGGCTGAGCGGATTGCTCGGAAAGAACACAGATCAACTAAGATAGGTGTAATTTCAGGGGTTGGCACACGCCATTACTACAGAAAATTGGGATATGAGCTTGAAGGGCCTTACATGGTGAAATATCTAATGTAA 159 0.434 GYGTLLMEEAERIARKEHRSTKIGVISGVGTRHYYRKLGYELEGPYMVKYLM 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19609g00001 52 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 52 IPR000182 GO:0016747
Trme19609g00001 52 Pfam Acetyltransferase (GNAT) family 1 40 IPR000182 GO:0016747
Trme19609g00001 52 PANTHER HISTONE ACETYLTRANSFERASE-RELATED 1 51 IPR039661 -
Trme19609g00001 52 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 50 IPR016181 -
Trme19609g00001 52 Gene3D - 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19609g00001 Trme-Chr19609 280 438 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trme19609g00001 Acetyltransf_1 1.1e-05 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19609g00001 K07739 - msin:131246226 105.916