Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme195777g00001 TACCCTTTAACAGAAATTGATGTTGCTACAAATGGCTTCAACCATAGGAGAATCATTGGAAAAGGTCGTTTAGGAACAGTTTATGCAGGAAAACTAGAAAATGAAGATGTTGTAGCTGTGAAACGCATTCACCCGGTTCTTGTATTAAGCAACGCGGGATTTGGATTCTCATCAGTGATGAAATGGCTCTCTTTAGCTCAACACCCTAACGTCGTTCCCATAATAGGTTTCTCAGAAGCGCCAGGTAATAGATATAAAAGTTAG 264 0.3977 YPLTEIDVATNGFNHRRIIGKGRLGTVYAGKLENEDVVAVKRIHPVLVLSNAGFGFSSVMKWLSLAQHPNVVPIIGFSEAPGNRYKS 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme195777g00001 87 Gene3D Phosphorylase Kinase; domain 1 1 85 - -
Trme195777g00001 87 SUPERFAMILY Protein kinase-like (PK-like) 3 85 IPR011009 -
Trme195777g00001 87 ProSiteProfiles Protein kinase domain profile. 13 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme195777g00001 87 FunFam serine/threonine-protein kinase-like protein ACR4 1 86 - -
Trme195777g00001 87 PANTHER OS01G0253100 PROTEIN 3 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme195777g00001 Trme-Chr195777 2 265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme195777g00001 1 84 Strubbelig Receptor Gene Family AT4G22130 33.333 3.26e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme195777g00001 - - mtr:11441273 160.229