Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19559g00001 ATGTCAATGATGTATATGCAGGGATCTTTCGGTGAGATTTTGAAAGCCCATTGGCGTGGAACGCCAGTTGCTGTCAAGCGCATTCTTCCATCTCTTTCAGAAGATAGAATGGTGATTCAGGACTTTAGGCATGAGGTCAATTTATTGGTGAAGCTTCGACACCCCAATATAGTTCAGTTTCTTGGAGCCGTTACCGACAGGAAGCCCCTCATGTTAATTACTGAGTATCTAAGAGGGGGTGATCTTCACCAGTACCTCAAAGATAAAGGTTCGCTTAGCCCTTCAACAGCTATCAACTTTTCCATGGATATTGCCAG 317 0.4416 MSMMYMQGSFGEILKAHWRGTPVAVKRILPSLSEDRMVIQDFRHEVNLLVKLRHPNIVQFLGAVTDRKPLMLITEYLRGGDLHQYLKDKGSLSPSTAINFSMDIA 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19559g00001 105 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 7 105 - -
Trme19559g00001 105 SUPERFAMILY Protein kinase-like (PK-like) 7 105 IPR011009 -
Trme19559g00001 105 ProSiteProfiles Protein kinase domain profile. 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme19559g00001 105 Pfam Protein tyrosine and serine/threonine kinase 7 105 IPR001245 GO:0004672|GO:0006468
Trme19559g00001 105 Gene3D Transferase(Phosphotransferase) domain 1 3 105 - -
Trme19559g00001 105 SMART tyrkin_6 7 105 IPR020635 GO:0004713|GO:0006468
Trme19559g00001 105 FunFam serine/threonine-protein kinase STY46-like 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19559g00001 Trme-Chr19559 278 1155 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19559g00001 2 105 MAP Kinase Kinase Kinase AT1G14000 82.692 6.69e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Trme19559g00001 PK_Tyr_Ser-Thr 3.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19559g00001 - - adu:107481197 191.43