Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19545g00001 ATAGAGGCTGAAGCAAAGTTGGTGGCAGAAGATTTGGGGATTGATTACATGTGGAAGAATATTGCCTACAGGCATGGCACCAAAGAGGATGAGGAGAGGATCCAGTTAGCTGTGGATAGTGAGGAAGCGATTCCCGGGAATGGGGACTGGGCTGTAAAGCTAGGAATAAATCTCTTTTATAGTGCAAATCTTAGCCGCTCTCCCCTTTATAGCAAGCAGATGCCTTACAATTCTGTTATATATTATGCATTTGGTCGTAGCTCACAAGCAAGCTCACCCATAGAACCAAAGGTCTATCAGAGAAGGTCCGACAAGCATAAAAAGGTAGTTGCTGGCAAATGGTGCGGTAAAGTTTGGATGTCTAATCAGGTCCATCCCCTTTTAGCAAAAAGGGATTCTGAAGATGTTGAGGATGAGAAAAGTTTACATGGATTGGTATTGCCTAATGTGAAAATTGAGGCATCTGGAAGTACCCCCAAAACTGAAACTGCTATTACAAAATCAGGTAGGAAAAGGAAAACGACCTTAGGCAGTAGACGAACCAGGAGAGGAGGATTTGTTAAAAAAGATGTGGTTTTAGATAATTCCTCTGAAGATAAACCCAATCCTCGGCCAAGGAGGATTCTTGAGCAAGCTAGGGGTGTTGAGAAAGATGGTGCAGCCGAAAGTGATGTAGTTTCTGATGATTCGCTTGATGATGATTATCGCATGCGACGTATGAGTTTTAATGTCAAAAAAGCTAAATTTATTGACAATGATGCGGTTTCAGATGATGCAATGGACTATGATTCTGATTGTAATCAGATGGGAGAACTTAGAAGCAAGCAAGTTGAATATACAGAGAGAGACTCAATTTCAGAGGATTCTTTGGATGTTGGTTCACTTCAACACAGAAAGACTTCTAGAAACAAGCATGCCAACTGCATAATTGAAGATGCAATTTCTGATGACCAAATGGAGAATGGTTGTCAGATGCAGCAAAAGAGAATTCCTAAAAGAAGGCAAGGCAAATCCCTTGCTGAAAAAGATTCAGTGATATCAGATGACCAACTGGAGCTGAACATGCAGAAGCAGCGGCGGAGTAATTCTAAAAGTAGGAAAGCCAAATACCTCACCGAAGAGGATAGTGTATCAGATAACCAAATGAATGTCTATTGTCGCAAGTACCAAAGAAGGACAGTTAAAGTCAGGCAAGCCAGATGTGTAGCAGGGGAAGATTTAATGTCTGATGACCAATTGGAGGATCCCTTTCTAAACCAGAAACCAAGTATTTCTAGAAGGAAAAACAAAAGCATTGATAGAGAAGTTAAAAATGAAATGTCTGATGACCAACCGGATGATCACTTTCAGAAGCAGCAGAAAAAAATTCCTAAG 1374 0.409 IEAEAKLVAEDLGIDYMWKNIAYRHGTKEDEERIQLAVDSEEAIPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNSVIYYAFGRSSQASSPIEPKVYQRRSDKHKKVVAGKWCGKVWMSNQVHPLLAKRDSEDVEDEKSLHGLVLPNVKIEASGSTPKTETAITKSGRKRKTTLGSRRTRRGGFVKKDVVLDNSSEDKPNPRPRRILEQARGVEKDGAAESDVVSDDSLDDDYRMRRMSFNVKKAKFIDNDAVSDDAMDYDSDCNQMGELRSKQVEYTERDSISEDSLDVGSLQHRKTSRNKHANCIIEDAISDDQMENGCQMQQKRIPKRRQGKSLAEKDSVISDDQLELNMQKQRRSNSKSRKAKYLTEEDSVSDNQMNVYCRKYQRRTVKVRQARCVAGEDLMSDDQLEDPFLNQKPSISRRKNKSIDREVKNEMSDDQPDDHFQKQQKKIPK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19545g00001 458 MobiDBLite consensus disorder prediction 334 348 - -
Trme19545g00001 458 MobiDBLite consensus disorder prediction 408 458 - -
Trme19545g00001 458 MobiDBLite consensus disorder prediction 426 458 - -
Trme19545g00001 458 MobiDBLite consensus disorder prediction 183 228 - -
Trme19545g00001 458 MobiDBLite consensus disorder prediction 321 376 - -
Trme19545g00001 458 MobiDBLite consensus disorder prediction 156 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19545g00001 Trme-Chr19545 2 1375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19545g00001 1 199 C2H2 Transcription Factor Family AT3G48430 52.657 2.86e-55 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19545g00001 - - psat:127084261 709.138