Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme194861g00001 AAGTGGAAAAAGGTTGCTACAAATGCTTCCAACAACAACAATAACCCGAGTAGTAGTAGTAGCGGTAGCAGCAGCACTAGTAATAAAGGTATCAAGTTTTTGAAACGAACATTGTCATTCACCGATATGTCTATTTCGAATGTGGATGTCGTTCCAAAAGGGTTCCTAGCTGTTTGTGTAGGGAAAGAGCTGAAGAGATTCATTATTCCAATGGATTACTTAAAACACCAAGCATTTGAGGTGTTGCTTCAAGAAGCTGAAGAGGAGTTTGGTTTCCAACAAGAGGGTGTGCTCAAAATTCCATGTCAAGTATCAATATTTGAGAAAATATTGAAGGTGGTGGAAGATAAAAAAGAAGCCTTAAACTTGCATGAGTTTGGATTCAATGGAGAGAAGGACATGGTTAGTTGTGATGTTACCCCCACTCATCATGCTCAAGTTTGTAGATGA 450 0.3889 KWKKVATNASNNNNNPSSSSSGSSSTSNKGIKFLKRTLSFTDMSISNVDVVPKGFLAVCVGKELKRFIIPMDYLKHQAFEVLLQEAEEEFGFQQEGVLKIPCQVSIFEKILKVVEDKKEALNLHEFGFNGEKDMVSCDVTPTHHAQVCR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme194861g00001 149 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 110 IPR003676 GO:0009733
Trme194861g00001 149 MobiDBLite consensus disorder prediction 1 28 - -
Trme194861g00001 149 Pfam Auxin responsive protein 26 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme194861g00001 Trme-Chr194861 1 450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme194861g00001 1 149 Calmodulin-binding Proteins AT2G24400 51.497 1.95e-43 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme194861g00001 K14488 - zju:107428189 191.045