Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19485g00002 ATGAATCTCTGGAGCGACGACAACTCATCAGTAATGGAGGCTTCCAAGACCTCCTCCGATTTATCATTCTTATCGCCATCACAACCAACACCGTCACAACCACCACAAACCACCACCGGATTCAACCAAGACACACTCCAACAACGTCTCCAAGCTGTAATGAAAGGCGCTGAAATCTGGTCTTACGCTATCTTCTGGCAACCTTCTTACTACTACCCCGGCTCTTCTCTTCTCGGGTGGGGTGACGGTTTTTACAATTCAAAATTAAAATCAAAATCTAAAGCTACTTCACCTGCTGAACAAGAACACCTGGACTTCTTGGACAAGCTTATTTTAATTCAACTCCGGTATGGTTGGTCGGCAGTGAGAATCTGGCCCTCTCGGCTTGCTAGAGGGCGAGACAAGGTCAGGAATATGGTTTACTGA 426 0.4648 MNLWSDDNSSVMEASKTSSDLSFLSPSQPTPSQPPQTTTGFNQDTLQQRLQAVMKGAEIWSYAIFWQPSYYYPGSSLLGWGDGFYNSKLKSKSKATSPAEQEHLDFLDKLILIQLRYGWSAVRIWPSRLARGRDKVRNMVY 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19485g00002 141 MobiDBLite consensus disorder prediction 19 43 - -
Trme19485g00002 141 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 46 101 IPR025610 -
Trme19485g00002 141 PANTHER MYC 20 101 IPR045084 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19485g00002 1 103 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 45.385 1.46e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19485g00002 K13422 - gmx:100790168 122.479