Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme194610g00001 GTAGATTTCGAATTCGATTCAATAGACGATTCAACCGTTCCACCTTTCTCATGGAAAAAGCTATGGATGTTCACTGGACCTGGATTCTTGATGAGTATTGCTTTTTTGGATCCAGGGAATTTGGAAGGGGATCTACAAGCTGGAGCAATTGCTGGTTATTCTCTTCTATGGTTGTTGATGTGGGCTACTTTTATGGGGTTATTGATTCANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNTAGCTGAGCTTTGTAGAGATGAGTATCCTAATTGGGCTCGTTATGTGCTTTGGTTTATGGCTGAACTTGCTTTAATTGGTGCTGATATTCAAGAGGTTATTGGTAGTGCTATTGCTATTCAGATTCTTAGCCGTGGTGTTTTGCCTCTTTGGGCTGGTGTTCTTATCACTGCTTCTGATTGGTATTTCTCCTTTTCTTTC 450 0.3689 VDFEFDSIDDSTVPPFSWKKLWMFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATFMGLLIXXXXXXXXXXXXXXXAELCRDEYPNWARYVLWFMAELALIGADIQEVIGSAIAIQILSRGVLPLWAGVLITASDWYFSFSF 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme194610g00001 150 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 15 145 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme194610g00001 150 Pfam Natural resistance-associated macrophage protein 42 144 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme194610g00001 150 PRINTS Natural resistance-associated macrophage protein signature 100 126 IPR001046 GO:0016020|GO:0030001|GO:0046873
Trme194610g00001 150 PRINTS Natural resistance-associated macrophage protein signature 130 149 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme194610g00001 Trme-Chr194610 1 450 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme194610g00001 4 146 Inorganic Solute Cotransporters AT1G47240 76.871 8.94e-72 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme194610g00001 K21398 - gmx:100795013 239.965