Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19457g00001 GAAGTTGAAGTTGACTTGACCTTACCTCACCATAAGCCTTTAAGACCAGACAAACTGCGGTCAACAAGTAATGGAGGAGCATCCAAAAGGGAATTCACTGCTGCTCTCAAAGATGGACCGCCTGGCCAAATTGCCGCTCAAACTTTTACTTTCCGTGAACTTGCTGCTGCAACAAAAAATTTCAGGCCTCAGTCCTTTTTAGGGGAAGGTGGTTTTGGAAGGGTCTACAAGGGACGCCTGGAATCTACGGGTCAGGCTGTTGCTGTTAAGCAGTTAGATAGAAACGGTCTCCAGGGTAATCGGGAGTTCCTTGTGGAGGTTCTCATGCTCAGTCTTCTACACCACCCTAACCTTGTCAGTCTCATTGGATACTGTGCGGATGGGGACCAACGCCTCCTAGTTTATGAATTTATGCCGTTGGGATCATTGGAAGACCACCTTCACGGTATGATTGTGTTCTTCCCTCCTCATATTGGGATGTGA 483 0.4762 EVEVDLTLPHHKPLRPDKLRSTSNGGASKREFTAALKDGPPGQIAAQTFTFRELAAATKNFRPQSFLGEGGFGRVYKGRLESTGQAVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVSLIGYCADGDQRLLVYEFMPLGSLEDHLHGMIVFFPPHIGM 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19457g00001 160 ProSiteProfiles Protein kinase domain profile. 61 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme19457g00001 160 Pfam Protein tyrosine and serine/threonine kinase 65 148 IPR001245 GO:0004672|GO:0006468
Trme19457g00001 160 Gene3D Phosphorylase Kinase; domain 1 45 137 - -
Trme19457g00001 160 MobiDBLite consensus disorder prediction 1 18 - -
Trme19457g00001 160 ProSitePatterns Protein kinases ATP-binding region signature. 67 90 IPR017441 GO:0005524
Trme19457g00001 160 FunFam Serine/threonine-protein kinase PBS1 34 137 - -
Trme19457g00001 160 MobiDBLite consensus disorder prediction 1 26 - -
Trme19457g00001 160 SUPERFAMILY Protein kinase-like (PK-like) 41 151 IPR011009 -
Trme19457g00001 160 PANTHER OS07G0668900 PROTEIN 37 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19457g00001 Trme-Chr19457 704 1375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19457g00001 13 147 Glycoside Hydrolase AT3G07070 65.926 1.15e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Trme19457g00001 PK_Tyr_Ser-Thr 3.8e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19457g00001 - K13430 tcc:18608901 228.794