Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1941g00001 ATGGCTGATAGGAGACACCAATATCCAACAGTAGCACAAAAGTTTGGTTCCCAATTTCATCTAAGATCCAACCTTTCTCCACATGTTGCAACTTCCTATGGAACTTTGGAACAGTTTGCATCCTCAAATGCATTGTTTGTTCCGTCACCGTCKGAGAAAAACTTTGCAAGCTTTGCAACTGATTTTCTGATGGGTGGAGTTTCTGCAGCAGTGTCCAAATCTGCAGCCGCTCCTATAGAGCGTGTGAAGCTTCTGATTCAAAACCAAGATGAAATGATTAAGGCTGGTAGGCTTTCTGAACCTTACAAA 309 0.4239 MADRRHQYPTVAQKFGSQFHLRSNLSPHVATSYGTLEQFASSNALFVPSPSEKNFASFATDFLMGGVSAAVSKSAAAPIERVKLLIQNQDEMIKAGRLSEPYK 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1941g00001 103 Pfam Mitochondrial carrier protein 57 94 IPR018108 -
Trme1941g00001 103 SUPERFAMILY Mitochondrial carrier 54 94 IPR023395 -
Trme1941g00001 103 PRINTS Mitochondrial carrier protein signature 74 88 IPR002067 GO:0055085
Trme1941g00001 103 PRINTS Mitochondrial carrier protein signature 61 74 IPR002067 GO:0055085
Trme1941g00001 103 Gene3D Mitochondrial carrier domain 51 103 IPR023395 -
Trme1941g00001 103 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 51 103 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1941g00001 Trme-Chr1941 1 309 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1941g00001 7 103 Antiporters AT3G08580 54.545 4.01e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1941g00001 K05863 - gmx:100800843 119.783