Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme194165g00001 ATGGGAGGATTAAGCTCAGGTTCAACTCCTCCGTGGGACTTAAGCGCTAACTTCACCGGTGGAAGGTCGGATCAAAGGTTTATAGGGGGAACTAGTGGTAACCAAACCCCTAGAGTGCAAGAGCCAGTTGTAGCAGCTCCTAAGGCAGTGGTGGAGGAGGTGGATGGAAACAAAGAGTGGGTGGCACAGGTGGAGCCAGGGGTTGATGTTACCTTTGTTTCTCTTCCTGATGGTGGAAATGATCTCAGAAGAATTCGCTTCAA 263 0.5019 MGGLSSGSTPPWDLSANFTGGRSDQRFIGGTSGNQTPRVQEPVVAAPKAVVEEVDGNKEWVAQVEPGVDVTFVSLPDGGNDLRRIRF 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme194165g00001 87 Pfam Transcription factor regulating root and shoot growth via Pin3 58 87 IPR013591 -
Trme194165g00001 87 MobiDBLite consensus disorder prediction 1 39 - -
Trme194165g00001 87 ProSiteProfiles BRX domain profile. 58 87 IPR013591 -
Trme194165g00001 87 PANTHER PROTEIN BREVIS RADIX-LIKE 1 6 87 IPR044532 -
Trme194165g00001 87 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme194165g00001 Trme-Chr194165 138 400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme194165g00001 1 87 Major Intrinsic Protein MIP AT1G31880 51.685 4.53e-19 77.8