Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme194161g00001 AATTTACGACCAGAAATTCCTAGATGCTGCCCAAGTGCCTTAGCAAGTATAATGAAAAGATGCTGGGACAAAAATCCGGAAAAGCGTCCTGAGATGCATGAGGTGGTGAGGATGTTGGAAACAATTGATACAAGCAAAGGAGGTGGAATGATACCAGATGACCAGACTCCATTATGTTTTTGTTTTATGGCTGGTCGCCGTGGTCCATAA 210 0.4333 NLRPEIPRCCPSALASIMKRCWDKNPEKRPEMHEVVRMLETIDTSKGGGMIPDDQTPLCFCFMAGRRGP 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme194161g00001 69 Pfam Protein tyrosine and serine/threonine kinase 3 39 IPR001245 GO:0004672|GO:0006468
Trme194161g00001 69 Gene3D Transferase(Phosphotransferase) domain 1 1 51 - -
Trme194161g00001 69 SUPERFAMILY Protein kinase-like (PK-like) 2 46 IPR011009 -
Trme194161g00001 69 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme194161g00001 Trme-Chr194161 106 315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme194161g00001 1 69 MAP Kinase Kinase Kinase AT3G22750 75.362 2.48e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Trme194161g00001 PK_Tyr_Ser-Thr 1.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme194161g00001 - - tcc:18603033 126.331