Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19388g00001 GCATTACAACACATAAGACAGATAGCGCAAGAATCAAGTGGTGAAATTCAGTATGGTGGCGGGCGCCAACCTGCTGTTTTGAGAACTTTTAGTCAGAGACTTTGCAGGGGTTTCAATGATGCTGTGAATGGATTTGTTGATGATGGTTGGTCATTGCTTGGAAATGATGGGGTGGAAGATGTGACAATAGCTGTGAACTCTTCTCCGAATAAGTTTTTAGGGTCGAATTACTCAACAATGTTCCCAACATTTGGAGGTGGTGTCCTGTGTGCCAAGGCATCAATGCTGCTGCAGAATGTTCCTCCTGCTTTACTTGTTCGATTTTTGAGGGAGCATCGATCAGAGTGGGCTGATTATGGTGTTGATGCATATTCTGCTGCTTCTCTCAAGTCTAGCCCCTATGCAGTTCCGTGTGCAAGACCTGGTGGCTTCCCTAGCAGCCAGGTCATTTTACCTCTTGCTCCTACGATCGAGCATGAGGAGTTCCTGGAGGTAGTTCGTATAGAAGGTCATGCATTTTCTCCGGAAGATGTTGCATTGGCACGTGATATGTATCTTTTGCAGCTCTGCAGTGGAATCGATGAAAGTTCAATTGGAGCATGTGCTCAACTTGTGTTCGCACCTATTGACGAATCCTTTGCGGATGACGCCCTTTTGTTGCCTTCTGGTTTTCGTGTTATTCCCTTGGATCCTAAATCA 699 0.4578 ALQHIRQIAQESSGEIQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSLLGNDGVEDVTIAVNSSPNKFLGSNYSTMFPTFGGGVLCAKASMLLQNVPPALLVRFLREHRSEWADYGVDAYSAASLKSSPYAVPCARPGGFPSSQVILPLAPTIEHEEFLEVVRIEGHAFSPEDVALARDMYLLQLCSGIDESSIGACAQLVFAPIDESFADDALLLPSGFRVIPLDPKS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19388g00001 233 SUPERFAMILY Bet v1-like 46 231 - -
Trme19388g00001 233 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 232 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19388g00001 Trme-Chr19388 72 1220 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19388g00001 1 233 Homeobox Transcription Factor Family AT2G34710 81.197 7.01e-138 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19388g00001 K09338 - gmx:100779499 444.506