Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme193813g00001 AGAGCATATGATAGGGCTGCTGTTATGTTTAGGGGAGTTGATGCTGATATAAACTTCATTTTGAGTGATTATGAAGAGGATTTGAAGCAGATGAGAGGTTTGAGTAAGGAAGAATTTATCCAAAGACTTCGTAGACAAACCAATGGAAACTCAAGGAGAAGTTCAACATACAGAAGTGCATTACCTCCTCACAAATATGGTCAAGAAGATCCACCATTTGTGGCCAAAACGTGA 234 0.3889 RAYDRAAVMFRGVDADINFILSDYEEDLKQMRGLSKEEFIQRLRRQTNGNSRRSSTYRSALPPHKYGQEDPPFVAKT 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme193813g00001 77 MobiDBLite consensus disorder prediction 44 58 - -
Trme193813g00001 77 MobiDBLite consensus disorder prediction 43 77 - -
Trme193813g00001 77 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme193813g00001 Trme-Chr193813 2 323 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme193813g00001 8 67 AP2-EREBP Transcription Factor Family AT2G28550 63.333 8.36e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme193813g00001 K09284 - gmx:100776138 107.842