Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19359g00001 AGAATCATTCTTAGGAGCACAATGGGTCCCATCGATGTCTACCTTATCAGTCAATTTGAAGAGAAATTTGAAGAGATTAATGCTGCTGAGCCCCCGACGAGCTTAGCTATTGCTTCAAGTTCAGGGTCTACTGAGCAACAAGTGACAGAAATGGTTCCTGCTGAATGCAGTGGAAACGGACTTGATCCTCAAGCTCTCCTCTCTTCTCAGACATACTCTGATTTAAATGTTTCACAAGAGCTTGCTGGGGGCATGATGAAGATAGTCCCTTCAGATGCTGATAATGACGCTGATTATTGGCTTCTATCGGATGCTGAAGTTAGCATAACAGATATGTGGAGAACAGATTCTAGTGTTGATTGGAGTGCTGTGGACATGCTTCATCCTGACTTTGAAATGATTGCGAGGCCACAAACTCCATCGCCTGTACTTGCAGAAGCACCATCAACTGTAGCTAACCCTACTCAGAGGATGCTGTCAGGAGCTGTTGAGTGTCAAGCTGAGAGTTCTTACTACACTTCAAGTAAATTATAG 534 0.4401 RIILRSTMGPIDVYLISQFEEKFEEINAAEPPTSLAIASSSGSTEQQVTEMVPAECSGNGLDPQALLSSQTYSDLNVSQELAGGMMKIVPSDADNDADYWLLSDAEVSITDMWRTDSSVDWSAVDMLHPDFEMIARPQTPSPVLAEAPSTVANPTQRMLSGAVECQAESSYYTSSKL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19359g00001 177 PANTHER TRANSCRIPTION FACTOR E2F 1 121 IPR015633 GO:0000978|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19359g00001 Trme-Chr19359 1 1321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19359g00001 1 157 E2F-DP Transcription Factor Family AT2G36010 47.619 5.74e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19359g00001 K06620 - gmx:100811762 239.965