Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme193493g00001 ATGGAAAAACTTTTGAGAGAGGTTGATATGATATTGCAAGACATCATTGATGAACACAAAAGCAGACCAATAGAAGCAAGAAAGGATGAAGATCTAGTTGATGTTCTTCTCAAGATTCAACAAGAAAATGATCATTCACAACATCCCTTGACTGATGAAAATATAAAATCCGTCATCCAGGACGTGTTCACTGGTGGTACCGATACATCGGCAGTCCTTGTGTTGTGGGCGATATCTGAGATGGTAAAGAACAATAATGTAATGGAAGAAGCACAAGTTGAG 282 0.383 MEKLLREVDMILQDIIDEHKSRPIEARKDEDLVDVLLKIQQENDHSQHPLTDENIKSVIQDVFTGGTDTSAVLVLWAISEMVKNNNVMEEAQVE 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme193493g00001 94 PRINTS E-class P450 group I signature 54 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme193493g00001 94 PRINTS E-class P450 group I signature 74 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme193493g00001 94 PANTHER OS08G0105600 PROTEIN 2 94 - -
Trme193493g00001 94 SUPERFAMILY Cytochrome P450 3 94 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme193493g00001 94 Gene3D Cytochrome P450 1 94 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme193493g00001 94 Pfam Cytochrome P450 4 94 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme193493g00001 Trme-Chr193493 16 376 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme193493g00001 1 92 Cytochrome P450 AT1G13080 38.710 4.84e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme193493g00001 - - mtr:11442302 135.576