Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19347g00001 ATGAACTATACTGAGCAACAACTAACAGCAGCTGTTGTTTCTGATGGATTACGACCGGTCCTTGCTAGCAAGGAGTTGGGTATACCATCAAGATTAATATCGATGATACAGAAATGTTGGGATGCTAATCCTAAAAGCAGACCTTCCTTTGATGATATTGTCAAGGAACTTGATTTTATTATGGAACAAAGGAAAGTAATGAAGGTGGAAGATATGCATATTAGAGCTTGTAACTTGCCTGTCGATCAACTTGTGGATAAGACTTATCAAGAGAGTATTAGCTGGTCTACTCAAGGTGAACTTTTGGCCAGGAATACCTCTAGTTCAACTGATTCTGGTTTCAGAACATGGTGTGAGTCTTATGATGAGCTTTTAGCATACCGTCCAACACTGTCTTGGGGATCTTATGCTACTTGTGGGAGAAGGGAGGCTATGGAGGACACACATTTCATTCTACCCCATGTTTGCAATGAAAAGGATGTCTATGCTTTTGGTATCTTTGATGGCCACAGAGGTACATATTGTTTGATATAA 534 0.3989 MNYTEQQLTAAVVSDGLRPVLASKELGIPSRLISMIQKCWDANPKSRPSFDDIVKELDFIMEQRKVMKVEDMHIRACNLPVDQLVDKTYQESISWSTQGELLARNTSSSTDSGFRTWCESYDELLAYRPTLSWGSYATCGRREAMEDTHFILPHVCNEKDVYAFGIFDGHRGTYCLI 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19347g00001 177 Gene3D - 119 176 IPR036457 -
Trme19347g00001 177 SUPERFAMILY PP2C-like 123 175 IPR036457 -
Trme19347g00001 177 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Trme19347g00001 177 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 5 62 - -
Trme19347g00001 177 SUPERFAMILY Protein kinase-like (PK-like) 15 77 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19347g00001 Trme-Chr19347 48 581 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19347g00001 1 173 PP2C-type Phosphatase Gene Family AT2G40860 46.927 1.08e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Trme19347g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19347g00001 - - gmx:100785390 262.307