Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme193366g00001 AGTGCCGGTGAGAGTGCAAGAGATCATTTTGGTCATGGAACACATGTCGCATCAACAGTAGGCGGAAGAAGGATTAAGGGTGTGAGCTATCATGGTCTTGCAAAAGGCACCATAAGAGGTGGAGTTCCATCTTCAAGAATTGCTGTATACAAAGTTTGTAACCCAAAATGTCGTGATGATAATATTTTAGCAGCTTTTGATGATGCCATTGCTGATGGAGTTGACATCATTAGCATATCTCTGGGTAACATAAATGCTGTTGAAATTCTTAAAGATACTCTTGCTATTGGTTCTTTTCATGCCATGGAAAAAGGAATACTTACAGTGCAAGCAGTTGGCAACTCTGGTCCTAACCCAAGTACTATTTCAAGTGGAGCACCTTGGATCTTTAGTGTTGCTGCAACTACCATAGATCGTCAATTCATTGATAAACTCATTCTTGGAAATGAAAA 452 0.3982 SAGESARDHFGHGTHVASTVGGRRIKGVSYHGLAKGTIRGGVPSSRIAVYKVCNPKCRDDNILAAFDDAIADGVDIISISLGNINAVEILKDTLAIGSFHAMEKGILTVQAVGNSGPNPSTISSGAPWIFSVAATTIDRQFIDKLILGNE 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme193366g00001 150 Gene3D - 138 149 - -
Trme193366g00001 150 ProSitePatterns Serine proteases, subtilase family, histidine active site. 12 22 IPR022398 -
Trme193366g00001 150 ProSiteProfiles Serine proteases, subtilase domain profile. 1 150 - -
Trme193366g00001 150 SUPERFAMILY Subtilisin-like 5 141 IPR036852 GO:0004252|GO:0006508
Trme193366g00001 150 Gene3D Peptidase S8/S53 domain 4 137 IPR036852 GO:0004252|GO:0006508
Trme193366g00001 150 Pfam Subtilase family 4 136 IPR000209 GO:0006508|GO:0008236
Trme193366g00001 150 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 150 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme193366g00001 Trme-Chr193366 1 452 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme193366g00001 4 149 Subtilisin-like Serine Gene Family AT3G46840 60.403 9.00e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme193366g00001 - - psat:127076787 210.69