Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme193271g00001 ATGCTTCCATTTCAGAACATGACAGCAGTACAGGCAGCATTTGCAGTTGTGAACAGAAATGTTCGCCCGATCTTGCCCAATGATTGTTTGCCTGTTCTYCGTGAGATCATGACAAGGTGCTGGGATCCCAACCCTGATGTCAGGCCACCCTTCRCTGAAATTGTTGCAATGCTTGAAAATGCCGAGATCGAGGTCATGACAACAGTTCGGAAGGCCAGGTTCAGGTGTTGCATGACCCAACCAATGACTGCGGAGTGA 258 0.4884 MLPFQNMTAVQAAFAVVNRNVRPILPNDCLPVLREIMTRCWDPNPDVRPPFXEIVAMLENAEIEVMTTVRKARFRCCMTQPMTAE 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme193271g00001 85 Gene3D Transferase(Phosphotransferase) domain 1 1 83 - -
Trme193271g00001 85 SUPERFAMILY Protein kinase-like (PK-like) 2 60 IPR011009 -
Trme193271g00001 85 Pfam Protein tyrosine and serine/threonine kinase 3 58 IPR001245 GO:0004672|GO:0006468
Trme193271g00001 85 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme193271g00001 Trme-Chr193271 114 371 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme193271g00001 1 85 MAP Kinase Kinase Kinase AT2G24360 75.294 7.61e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Trme193271g00001 PK_Tyr_Ser-Thr 2.8e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme193271g00001 - - lang:109350762 169.088