Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19322g00001 TTCCCGGTCCTTGCAAGAATCTTAGCTAAGCTAAAGCTTTTGTATACAAAGCTTGGAAAAGATGCATTAACAGCAGCTATGTTAACTGATGCATATGGTTGGGTTTTATTCACATTGTTGATTCCTTATTCTAATATTGGTGGAAAGCCTCTTCTCTCAGTAATCAATTGTCTTGGTACGCATCCTATTGTTGGAGCTTTTGTGTTTGGATTGATTTTGCCTCATGGGAAGTTTGCTGTTATGGTTATGGAAATGTCAGATGATTTTGTTTCTGGGATTTTATGTCCTGTCTTCTTTGCTGGATTTGGTTTTAGACTCAACATGCCTTTTCTTTTGAAGCAAGACTCTGCAGGTTTAATGATGTTGATTGCGGTTTTGTTATGCATACCAAAAGTTTTGAGCTCTTTGATTGTCACTTTTTTCTTCGGTATGCCTGCTCGAGATGGCCTTGCCATTGGTTTGCTTCTCAACACCAAGGGCGTCATGGCTATCATACTACTAAATGTTGCTTGGGACAAAAAGATTTTGGATCCATATTGTTTCATGGTTATGATGCTTGCGATTATATTAATGACAGTGATTGTTTCTCCCTTGATAAGTGCTATATACCAACCAAAATTCCGATTCATGCAATCGCAATTAAAGACCATGCAAAAACTAAGGTTCGATATGGAACTTCGAGTTGTGGCATGTGTTCACAATACTAAACATGCCAATAGCATGATCCATGTCCTTGAAGCAACAAATGCAACCAGAGTTTCACCTATACATGTCTCAGTAGCTCACCTAGTTGAACTAACTAGACATGGCACAGCTATTCTTGTTTCACAAATGGATCATTCAGACAGCACTGTTGGAACAGAAACA 867 0.3852 FPVLARILAKLKLLYTKLGKDALTAAMLTDAYGWVLFTLLIPYSNIGGKPLLSVINCLGTHPIVGAFVFGLILPHGKFAVMVMEMSDDFVSGILCPVFFAGFGFRLNMPFLLKQDSAGLMMLIAVLLCIPKVLSSLIVTFFFGMPARDGLAIGLLLNTKGVMAIILLNVAWDKKILDPYCFMVMMLAIILMTVIVSPLISAIYQPKFRFMQSQLKTMQKLRFDMELRVVACVHNTKHANSMIHVLEATNATRVSPIHVSVAHLVELTRHGTAILVSQMDHSDSTVGTET 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19322g00001 289 Pfam Sodium/hydrogen exchanger family 56 198 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trme19322g00001 289 Gene3D - 55 209 IPR038770 -
Trme19322g00001 289 Gene3D - 1 54 IPR038770 -
Trme19322g00001 289 PANTHER CATION/H + ANTIPORTER 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19322g00001 Trme-Chr19322 178 1381 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19322g00001 1 34 Antiporter Super Family AT2G13620 52.941 7.07e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19322g00001 - - psat:127095231 442.58