Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme192982g00001 ATGGAACAAGAACAAGAAAGAGGGATTACCATTACTTCTGCTGCAACCACCACATTTTGGGATAAGCACAGGATCAACATCATTGATACTCCTGGTCATGTCGACTTCACCTTAGAAGTGGAGCGTGCTCTTAGGGTGTTGGATGGAGCTATATGCTTGTTTGACAGTGTTGCTGGTGTGGAACCACAATCAGAAACCGTGTGGAGGCAAGCTGATAGATATGGGGTCCCTCGAATTTGTTTTGTCAATAAAATGGACCGCCTTGGAGCAAATTTTTTCCGAACAATAGACATGATAGTGACAAACTTAGGTGCTAAACCACTTGTACTTCAGCTACCAATTGGTGCAGAAGATAGCTTTAAGGGAGTTATTGATCTCGTTAGGATGAAAGCTATAGTTTGGGGTGGAGAAGAGCTAGGTGCCAAGTTTTCTTATGAA 438 0.4292 MEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADRYGVPRICFVNKMDRLGANFFRTIDMIVTNLGAKPLVLQLPIGAEDSFKGVIDLVRMKAIVWGGEELGAKFSYE 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme192982g00001 146 PRINTS GTP-binding elongation factor signature 78 87 IPR000795 GO:0003924|GO:0005525
Trme192982g00001 146 PRINTS GTP-binding elongation factor signature 26 36 IPR000795 GO:0003924|GO:0005525
Trme192982g00001 146 PRINTS GTP-binding elongation factor signature 6 14 IPR000795 GO:0003924|GO:0005525
Trme192982g00001 146 PRINTS GTP-binding elongation factor signature 42 53 IPR000795 GO:0003924|GO:0005525
Trme192982g00001 146 Pfam Elongation factor Tu GTP binding domain 1 106 IPR000795 GO:0003924|GO:0005525
Trme192982g00001 146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 137 IPR027417 -
Trme192982g00001 146 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 146 IPR000795 GO:0003924|GO:0005525
Trme192982g00001 146 PANTHER TRANSLATION ELONGATION FACTOR G-RELATED 1 145 - -
Trme192982g00001 146 Gene3D - 1 146 IPR027417 -
Trme192982g00001 146 NCBIfam small GTP-binding protein domain 2 128 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme192982g00001 Trme-Chr192982 16 453 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme192982g00001 4 102 Eukaryotic Initiation Factors Gene Family AT1G56070 36.885 2.43e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme192982g00001 K02355 - ath:AT1G62750 286.96