Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme192831g00001 ATGGCTTCGGACAACAAAATGCTTGGAGAATTTGAGCTTGTTGGCATTCCTCCTTCCCCTAGAGGTATGCCTCAAATTGAGGTCACCTTTGACATTGATGCTAATGGCATTGTTACTGTGTCTGCCAAAGACAAATCCACTGGTAAAGAACAACAAATCACTATTAGGTCGTCTGGTGGACTATCCGACGATGAGATCGAAAAGATGGTGAAAGAAGCAGAACTACATGCTCAGAAAGACCAAGAAAGAAAGGCTTTAATTGATGTTAGAAATACCGCCGACACATCCATCTATAGCATCGAGAAGAGTTTGGCTGAATATCGAGACAAGATTCCTAGTGAAGT 344 0.4215 MASDNKMLGEFELVGIPPSPRGMPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSDDEIEKMVKEAELHAQKDQERKALIDVRNTADTSIYSIEKSLAEYRDKIPSEV 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme192831g00001 115 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 60 IPR029047 -
Trme192831g00001 115 Pfam Hsp70 protein 1 114 IPR013126 GO:0005524|GO:0140662
Trme192831g00001 115 Gene3D - 61 115 IPR029048 -
Trme192831g00001 115 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 94 IPR029047 -
Trme192831g00001 115 PANTHER HEAT SHOCK PROTEIN 70KDA 1 106 IPR013126 GO:0005524|GO:0140662
Trme192831g00001 115 FunFam Molecular chaperone DnaK 61 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme192831g00001 Trme-Chr192831 1 344 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme192831g00001 4 104 Calmodulin-binding Proteins AT3G09440 53.922 5.76e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme192831g00001 K04043 - qsa:O6P43_031689 216.468