Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19281g00001 ATGGATGTGAGCAACTCCAAGTATCTTACAGAGACTCCAAAGTTTTTTTGGACCCCAAAACTTGAGCGGCTAGATTTTACTGGATGCACAAACTTAACACAGGTCCATCCATCGATTGGACATCTAACAGAACTCGTCTTCTTAAGTTTGCGAAACTGCAGCAGTTTGGTCGACCTCGATTTTGGTGGTGTTTCAAATTTAAATTCGTTGCGAGTTCTACGCCTCTCTGGTTGCACAAAACTTCAAAAGATGCCAGATTTTACAGGTGCATCAAATCTTGAGTACCTTGATATGGATGGATGCATTAGTTTATCCACAGTCCATGAATCCATTGGGGTTCTTGCAAAGCTTAGATTCTTGAGTTTAAGGGATTGCATAATTCTTGCTGGAATGCCCAATAGCATTAATACCATGACTTCTCTTGTAACTCTAGATTTATGCGGCTGCTTGAAACTTACAACTCTGNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTATGGAATCTTTGATTTTTCTTGATGTAAGCTTTTGCAATCTTGACGAAGTACCTGATGCTATTGGAGACCTAAAATGTCTAGAAAGATTAAATCTACAAGGAAACAACTTTAAGTTACTACCTTCTACTATCAATAAGCTTGGAAGTCTGGCATATTTGAACTTGGCTCATTGCCATAAGCTTCAAACTTTTCCACATATACTTTCACAAAAAAAATCATCTCTAGTGGGAAGTTATTTTAAAATGGCATCGGGATCGCGTGATCATAG 764 0.3691 MDVSNSKYLTETPKFFWTPKLERLDFTGCTNLTQVHPSIGHLTELVFLSLRNCSSLVDLDFGGVSNLNSLRVLRLSGCTKLQKMPDFTGASNLEYLDMDGCISLSTVHESIGVLAKLRFLSLRDCIILAGMPNSINTMTSLVTLDLCGCLKLTTLXXXXXXXXXXMESLIFLDVSFCNLDEVPDAIGDLKCLERLNLQGNNFKLLPSTINKLGSLAYLNLAHCHKLQTFPHILSQKKSSLVGSYFKMASGSRDH 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19281g00001 254 Gene3D Ribonuclease Inhibitor 88 160 IPR032675 -
Trme19281g00001 254 Gene3D Ribonuclease Inhibitor 1 87 IPR032675 -
Trme19281g00001 254 Gene3D Ribonuclease Inhibitor 161 243 IPR032675 -
Trme19281g00001 254 SUPERFAMILY L domain-like 4 233 - -
Trme19281g00001 254 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 66 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19281g00001 Trme-Chr19281 377 1140 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19281g00001 65 230 WRKY Transcription Factor Family AT4G12020 35.928 2.26e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19281g00001 - - lja:Lj3g3v1556600.1 308.145