Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme192741g00001 ATGGAATTATGTGAAGGGGGTGAGTTGTTTGATAGGATTGTGGAAAGGGGTCATTACACTGAAAGAAAAGCAGCTAAACTTGCTAGGACTATTGTTAGTGTTGTTGAAGCATGTCACTCACTTGGTGTAATGCATCGCGATCTTAAGCCTGAGAATTTTCTTTTTGTTGATGGACATGAAGACTCTACTCTTAAGGCAATTGATTTTGGAATGTCTGTTTTCTTCAAACCAG 232 0.3879 MELCEGGELFDRIVERGHYTERKAAKLARTIVSVVEACHSLGVMHRDLKPENFLFVDGHEDSTLKAIDFGMSVFFKP 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme192741g00001 77 Pfam Protein kinase domain 1 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme192741g00001 77 ProSiteProfiles Protein kinase domain profile. 1 77 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme192741g00001 77 Gene3D Transferase(Phosphotransferase) domain 1 4 75 - -
Trme192741g00001 77 SUPERFAMILY Protein kinase-like (PK-like) 1 75 IPR011009 -
Trme192741g00001 77 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 76 - -
Trme192741g00001 77 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme192741g00001 Trme-Chr192741 198 429 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme192741g00001 1 77 EF-hand Containing Proteins AT3G10660 83.117 1.32e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme192741g00001 Pkinase 1.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme192741g00001 K13412 - gmx:100814475 151.369