Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19271g00001 ATGTATGTATTTGATGCGGCCGCAATTGTTATTGCAGAGGCTTTTAAAACCTTTATATTGCCGCCACAACTGCAGTTGCAGACCGTAATTTATAACTGTGCGTTTGATCGAGTAATGATATTGGCACCAACCACGTATATTTTCTTTGCTTCTGCTTTACCTGTTATTGCTTTCGGCGCGCAACTTAGTAGGGACACAGATGGAAGCTTGAGCACTGTAGAAACATTGGCTTCTACAGCCATTTGNGGAATCATACACTCCATTTTTGGTGGACAGCCTCTGCTAGTACTTGGAGTGGCAGAACCTACTATCCTTATGGTTTGTGTATGGACTGCTCTATTGCTATTTCTTTTAGCAATATTCAACGCTGCCATTATCATCAATAGATTTACAAGGATTGCTGGTGAGCTTTTTGGCATGTTGATCACAGTCTTATTCATACAAGAGGCTATCAAG 456 0.4101 MYVFDAAAIVIAEAFKTFILPPQLQLQTVIYNCAFDRVMILAPTTYIFFASALPVIAFGAQLSRDTDGSLSTVETLASTAIXGIIHSIFGGQPLLVLGVAEPTILMVCVWTALLLFLLAIFNAAIIINRFTRIAGELFGMLITVLFIQEAIK 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19271g00001 152 Pfam HCO3- transporter family 38 152 IPR011531 GO:0006820|GO:0016020
Trme19271g00001 152 PANTHER ANION EXCHANGE PROTEIN 105 152 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19271g00001 Trme-Chr19271 100 1209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19271g00001 40 152 Antiporters AT1G74810 68.116 5.28e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19271g00001 K24194 - mtr:120578422 177.563