Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme192645g00001 ATGCAAGCTATGACTCTGTGGTTGTTGGAATTTGTGCTAAATTTTGTTAAGATTTACCAAGATTCAGCATTCTCAGCTGGTGAACTGTTGGCAGTTGCACTTGCACATGCATTTGCTCTATTTGCTGCTGTATCTTCTAGCATGCATGTATCTGGTGGCCATGTCAACCCAGCAGTGACATTTGGTGCTCTCATAGGTGGCAGGATCTCTGTGCTTCGTGCTGTCTACTATTGGATTGCTCAACTTCTTGGTGCTATTGTGGCTGCCCTCTTGCTTAGGCTTGTCACTAATAATATG 297 0.4411 MQAMTLWLLEFVLNFVKIYQDSAFSAGELLAVALAHAFALFAAVSSSMHVSGGHVNPAVTFGALIGGRISVLRAVYYWIAQLLGAIVAALLLRLVTNNM 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme192645g00001 99 PRINTS Major intrinsic protein family signature 36 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme192645g00001 99 PRINTS Major intrinsic protein family signature 73 92 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme192645g00001 99 Pfam Major intrinsic protein 15 98 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme192645g00001 99 SUPERFAMILY Aquaporin-like 12 98 IPR023271 -
Trme192645g00001 99 Gene3D Glycerol uptake facilitator protein. 3 99 IPR023271 -
Trme192645g00001 99 ProSitePatterns MIP family signature. 54 62 IPR022357 -
Trme192645g00001 99 PANTHER AQUAPORIN-8 9 99 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme192645g00001 Trme-Chr192645 26 392 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme192645g00001 17 99 Major Intrinsic Protein MIP AT4G01470 61.446 1.24e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme192645g00001 K09873 - gmx:100805863 136.732