Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19245g00001 ATGTGCTCACTTTTAAGGACAGAGTCTGAGGAAATTCGCTTTTCAGGGATATGGGGTATGGGTGGCATAGGAAAGACAACTCTAGCCAAACTTGTCTACAATAAAATCCATCACCAATTTGATTTTAGTTGCTTTCTTGAGAATGTTAGAGAGATTTCTAGTGAAAGAGATGGTCTGCTTTGTTTACAAAGAAAATTGCTTTCTCATCTAAAATTAAGCAGCATGAGAATTGAAAGTTTGGACCAAGGAAGGGAGACAATACGTAATCTTTTATTCAATAAAAAAGTTCTCCTTGTCCTTGATGACCTAAGTTCTGATATCCAACTAGAGAATTTAGCTGGAAAGCAAGAATGGTTTGGTCCAAGGAGCAGGATAATAATAACTACTAGAGACAAGCATCTCCTAGCATCACTAGGCGTGTGTAAAAGTTATGATGCTCAAATCTTAAACAGTGATGAATCCCTTCAACTTTTTTGTCAAAAAGCTTTTAGAAGAGGAAAACCTGAAGAAGGTTTCATAGAGTTGTCAAAACTGGTGGTTCAATGCGCTGGAGGTATTCCCTTGGCACTCAAAGTGTTGGGTTCATTCCTCTGTGGAAGGAGGGCATCTGTATGGGAAGACGCTTTGAAAATGTTGCAGCAGGATCTTCAAAATGATATTTACAAGACATTGAGAATAAGTTATGATGGATTAAGGGACATGGAAAAGG 709 0.3808 MCSLLRTESEEIRFSGIWGMGGIGKTTLAKLVYNKIHHQFDFSCFLENVREISSERDGLLCLQRKLLSHLKLSSMRIESLDQGRETIRNLLFNKKVLLVLDDLSSDIQLENLAGKQEWFGPRSRIIITTRDKHLLASLGVCKSYDAQILNSDESLQLFCQKAFRRGKPEEGFIELSKLVVQCAGGIPLALKVLGSFLCGRRASVWEDALKMLQQDLQNDIYKTLRISYDGLRDMEK 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19245g00001 236 Gene3D - 148 232 IPR042197 -
Trme19245g00001 236 PRINTS Disease resistance protein signature 183 197 - -
Trme19245g00001 236 PRINTS Disease resistance protein signature 14 29 - -
Trme19245g00001 236 PRINTS Disease resistance protein signature 90 104 - -
Trme19245g00001 236 Gene3D - 1 141 IPR027417 -
Trme19245g00001 236 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 234 IPR044974 GO:0006952
Trme19245g00001 236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 236 IPR027417 -
Trme19245g00001 236 Pfam NB-ARC domain 7 229 IPR002182 GO:0043531
Trme19245g00001 236 FunFam Disease resistance protein (TIR-NBS-LRR class) 150 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19245g00001 Trme-Chr19245 1 709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19245g00001 4 236 WRKY Transcription Factor Family AT5G45050 37.447 7.95e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19245g00001 - - tpra:123888765 441.039