Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19174g00001 ATGTTCAACGCGGTGTTGGAGAATGCCTGCAGTGAGCAAGGAGCAAGAATGTCTGCCATGGACAGCTCTAGCAGGAATGCTGGGGATATGCTTGATCGTCTGACCCTCACTTATAATAGAACTCGTCAAGCATCAATCACCACTGAGTTGATTGAGATTATCTCTGGAGCATCAGCACTGACAG 184 0.4783 MFNAVLENACSEQGARMSAMDSSSRNAGDMLDRLTLTYNRTRQASITTELIEIISGASALT 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19174g00001 61 ProSitePatterns ATP synthase gamma subunit signature. 46 59 IPR023632 -
Trme19174g00001 61 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 1 60 IPR035968 GO:0015986|GO:0045261|GO:0046933
Trme19174g00001 61 PANTHER ATP SYNTHASE GAMMA CHAIN 1 60 IPR000131 GO:0015986|GO:0045261|GO:0046933
Trme19174g00001 61 Gene3D ATP synthase, gamma subunit, helix hairpin domain 1 61 - -
Trme19174g00001 61 PRINTS ATP synthase gamma subunit signature 38 59 IPR000131 GO:0015986|GO:0045261|GO:0046933
Trme19174g00001 61 PRINTS ATP synthase gamma subunit signature 7 26 IPR000131 GO:0015986|GO:0045261|GO:0046933
Trme19174g00001 61 FunFam ATP synthase gamma chain 14 57 - -
Trme19174g00001 61 Pfam ATP synthase 1 60 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19174g00001 1 60 Primary Pumps ATPases AT1G15700 46.667 5.48e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19174g00001 K02136 - egt:105973487 118.242