Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19158g00001 TATGTGCATGGTTCACCATTGCTTGAAAGCTCTAGTGCCTTTGAGCTACGGGAATCTGCAGAAAAAACAGCGGAAGCTCTTGGCAGGGTACTGATGCTGGACTTAGTCATCCGAAATGAAGATAGGCTCCCTTGCCGTGAGCTTAGATGGCGTGGGAATTCTGCAAATTTGTTGTTGGCTGAAAAGATGATCTCTGGAAATACAAATACACTAGAAGCCGCTTTGGATTCTGCAATTAATCAATATAGACCAAAGGTGGTTAGGGCACTTCAAAAAGAAAGAAGGTCAAGTTCAGTAGATAGCAAATTGAATTCCCATAATCCCGGCTTGATCTCACAAGCCTCTGATCTTTCAGAGATCATAGATTCACCGAGATCCGCTGACATGAGCCTTATAAGTCAAATATCAGGAGAATCAATGTCTTCTGACCTTAACATTGTAGTCATTGATTCTGGTGTTCCTCGGCGACCCCCGGCTGGAAAACGTGCAAATGATCAGGTTAATTATCCTAAGTTGGTTGAGTTGCTGATCAATAGTTCTGAGTATGCATCAAACCTGTTAAATGATATAACTGGAGGGAAATTAGGATGCTCTCTACCAGAAGACATGGATGCAACTGATATACATGCAAGTGACATGACATCAGTAGTTCAAGCATTTCGTACTGGTTTCCGAGCTGCTCTTAGGGATCTACAGGGATTCCATATATTCCTACTCACCCTTCATCAAAGACTTGATACTTTGTTGCGATCATTCATGAACATTATAAGCAAACTATCTTCAGGGGAATCTGACAAGGAGGACGTATTGGTTCCTGACTCGCCTTCACTTGCTGGTAGTTCCTCTCCAATAAGTAGACATGCTAATGATAACAATCAAGATATTACTGATTCGGAATCACAGAGAACTACTTCAAGGTCATTGTCTTCATGTAATAGAGATTGCAGTGACTCAACTTCAGCGTCAAGAGAGAGTTGGCATGGAAGGTCCTGTAAAGGATATGGGGAGCTACAGCGTAATCTCCGTTTGACAGCCAAGCTCCGTGACTTTAATAAATATGCCAAGGTTGGTAGCATAATATGA 1083 0.4211 YVHGSPLLESSSAFELRESAEKTAEALGRVLMLDLVIRNEDRLPCRELRWRGNSANLLLAEKMISGNTNTLEAALDSAINQYRPKVVRALQKERRSSSVDSKLNSHNPGLISQASDLSEIIDSPRSADMSLISQISGESMSSDLNIVVIDSGVPRRPPAGKRANDQVNYPKLVELLINSSEYASNLLNDITGGKLGCSLPEDMDATDIHASDMTSVVQAFRTGFRAALRDLQGFHIFLLTLHQRLDTLLRSFMNIISKLSSGESDKEDVLVPDSPSLAGSSSPISRHANDNNQDITDSESQRTTSRSLSSCNRDCSDSTSASRESWHGRSCKGYGELQRNLRLTAKLRDFNKYAKVGSII 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19158g00001 360 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 357 IPR035010 GO:0004721|GO:0009737|GO:0043622
Trme19158g00001 360 MobiDBLite consensus disorder prediction 264 329 - -
Trme19158g00001 360 SUPERFAMILY Protein kinase-like (PK-like) 1 166 IPR011009 -
Trme19158g00001 360 Gene3D - 7 136 IPR036940 -
Trme19158g00001 360 Pfam Actin-fragmin kinase, catalytic 1 152 IPR015275 -
Trme19158g00001 360 MobiDBLite consensus disorder prediction 275 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19158g00001 Trme-Chr19158 99 1181 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19158g00001 1 356 Protein tyrosine phosphatase (PTP) family AT5G23720 54.076 1.41e-117 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19158g00001 K14165 - gmx:100791993 509.99