Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme191069g00001 ATGGACGGGCAAAGGGACACGGAGATTGCGATCGGAGGCTACCAAACTCAAGATGGAGTTGACCACTGCATGAGCAAAGGTGATATTCATGCATACAGAATGTCAATGTGGTATGAACACACTGGTAGTGCTGAGAAGTTGTTTTTAGAGCCAGAAAGTTTAGAATGTGTGCAGAGAATGTGTTCAATAGGTGATAAAATGTGGAAAATATATAGTAGTGAAGAAATTGTTGACATGGAAGGTGTGCACCTAGTAACTTACCCTATGAGAGTAACACAAGATGGATCTGTGAAGGACTTAACTAATGGTGAGGATCATTTTCCTGATACAAAATCTTTAGTGAAAGGGACAAGATCAAAATTATTACCCTCTATCATGACCACTTAG 387 0.3979 MDGQRDTEIAIGGYQTQDGVDHCMSKGDIHAYRMSMWYEHTGSAEKLFLEPESLECVQRMCSIGDKMWKIYSSEEIVDMEGVHLVTYPMRVTQDGSVKDLTNGEDHFPDTKSLVKGTRSKLLPSIMTT 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme191069g00001 128 PANTHER PHOSPHOLIPASE D 1 110 IPR015679 -
Trme191069g00001 128 Pfam Phospholipase D C terminal 45 117 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme191069g00001 Trme-Chr191069 15 401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme191069g00001 1 128 Phospholipase D Gene Family (Wang group) AT1G55180 54.545 1.41e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme191069g00001 K01115 - gmx:100807431 202.986