Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme190761g00001 GGTGCTTCTATATTTACTACTTCTGGCGTTGCTGCAAGGAAATTTCAGACCGAGATTGAGGCGGGGCAGGTTGGTATCAATGTTCCTATTCCAGTTCCTTTGCCATTTTTCTCATTTACCGGCAACAAGGCGTCATTTGCCGGCGATCTCAATTTCTATGGCTAG 165 0.4606 GASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYG 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme190761g00001 54 SUPERFAMILY ALDH-like 2 50 IPR016161 GO:0016491
Trme190761g00001 54 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 40 IPR016163 GO:0016620
Trme190761g00001 54 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 54 IPR010061 GO:0004491
Trme190761g00001 54 Pfam Aldehyde dehydrogenase family 2 49 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme190761g00001 Trme-Chr190761 1 444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme190761g00001 1 54 Aldehyde Dehydrogenase Gene Family AT2G14170 88.889 1.04e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme190761g00001 K00140 - qsa:O6P43_012444 111.694