Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19073g00001 ATGGGATCTGCAGAATTGCAGATACAAACTGATACTGGTCTAATTGGCATGCCAAGCAATGTCTGTTGTGTTGTTGTGGAGTATCTTGCTGGAGGTACACTGAAATCATACCTAATAAAGAACAGGAGGAGGAAATTAGCTTTCAAGGTTGTCATCCAGCTGGCGCTTGATTTAGCAAGAGGGCTGAGTTATCTTCACTCTCAGAAGATTGTCCACAGAGATGTGAAGACAGAGAACATGCTGTTAGATAAGACTCGCACAGTTAAAATTGCTGATTTTGGGGTTGCACGAGTCGAGGCATCAAATCCTAATGATATGACTGGGGAGACTGGAACTCTTGGTTATATGGCTCCAGAG 357 0.4342 MGSAELQIQTDTGLIGMPSNVCCVVVEYLAGGTLKSYLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPE 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19073g00001 119 SMART serkin_6 1 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme19073g00001 119 ProSitePatterns Serine/Threonine protein kinases active-site signature. 70 82 IPR008271 GO:0004672|GO:0006468
Trme19073g00001 119 SUPERFAMILY Protein kinase-like (PK-like) 20 119 IPR011009 -
Trme19073g00001 119 Pfam Protein kinase domain 20 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme19073g00001 119 Gene3D Transferase(Phosphotransferase) domain 1 12 119 - -
Trme19073g00001 119 ProSiteProfiles Protein kinase domain profile. 1 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme19073g00001 119 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 14 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19073g00001 Trme-Chr19073 233 724 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19073g00001 1 119 MAP Kinase Kinase Kinase AT5G50000 86.555 1.89e-74 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Trme19073g00001 Pkinase 2.6e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19073g00001 - - csv:101209182 229.565