Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19045g00001 ATGGCACCTGTGGTTGCCTCATTCTCATCTAGGGGTCCAAGCAAGGCTGCTGTCATTCTCAAGCCAGATGTAATTGCCCCAGGGGTAGACATTGTAGCGAGTTGGCCAACAAATACTCCTACTTCTGATGCTCCCGGTGATAATAGAACATTCGAGTTTAATATTGCTTCAGGAACATCAATTTCATGCCCCCACGTGTCTGGTGCAGCGGCGGACATAAAATCATTTCATCCCACATGGTCGCCTGCTGCTATTCGTTCAGCTTTAATGACAACAGCTAATAACCAGATGAGTTTTGGAAATAATCGTGATACAGAATTTGGTTATGGAGCTGGTCAAATTAACCCAGTCAATGCTCGGAATCCTGGTCTAATATATGATGCAAATGTAGATGATTATATTAGATTTTTATGTAGTTATGGATACAGCACAACAACTTTGCAACAACTAACTAGGGATCACATCACTTGCTCCAATGCAACCCACACATCAACAAGGGATTTAAACTATCCATCATTTACTTTAAAAGCCCCAAGCCCTAAACAACATTTCAATGGAAGTTTTCGAAGAATTGTTACAAATGTTGGATTACCCCTCTCTACCTACAGAGCAATTGTGACAGCTCCAGAAGGATTACAAATTTCAGTGAATCCTGATGTTTTGTCATTTACTTCTTTAGGCGAAAAGAAGACTTTTGTTCTCAGTGTAGAAGGTGCAATGGAGGAAGCATTTAGGTCAGCATCTTTGACTTGGGATTGTGGGGATTTTAAAGTGAGAAGTCCCATTGTTGTTTACGATGTACGTGCGGAGAAAGAGCAAGTATACCCATCCCTAAATGAGCAAGGACAATCATCCTCCCCAAATTCTCATGTTCCAGTTAAAGTTATTGTGTTGTGTGCCATTTTTAGTTTTATTTTAATTTCTATTGTTATATATATTATATAG 945 0.3968 MAPVVASFSSRGPSKAAVILKPDVIAPGVDIVASWPTNTPTSDAPGDNRTFEFNIASGTSISCPHVSGAAADIKSFHPTWSPAAIRSALMTTANNQMSFGNNRDTEFGYGAGQINPVNARNPGLIYDANVDDYIRFLCSYGYSTTTLQQLTRDHITCSNATHTSTRDLNYPSFTLKAPSPKQHFNGSFRRIVTNVGLPLSTYRAIVTAPEGLQISVNPDVLSFTSLGEKKTFVLSVEGAMEEAFRSASLTWDCGDFKVRSPIVVYDVRAEKEQVYPSLNEQGQSSSPNSHVPVKVIVLCAIFSFILISIVIYII 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19045g00001 314 SUPERFAMILY Subtilisin-like 4 150 IPR036852 GO:0004252|GO:0006508
Trme19045g00001 314 ProSitePatterns Serine proteases, subtilase family, serine active site. 58 68 IPR023828 -
Trme19045g00001 314 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 264 IPR045051 -
Trme19045g00001 314 Gene3D - 137 267 - -
Trme19045g00001 314 ProSiteProfiles Serine proteases, subtilase domain profile. 1 120 - -
Trme19045g00001 314 Pfam Fibronectin type-III domain 167 264 IPR041469 -
Trme19045g00001 314 Pfam Subtilase family 5 110 IPR000209 GO:0006508|GO:0008236
Trme19045g00001 314 Gene3D Peptidase S8/S53 domain 2 133 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19045g00001 Trme-Chr19045 76 1345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19045g00001 1 265 Subtilisin-like Serine Gene Family AT5G58830 46.324 1.32e-70 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19045g00001 - - vvo:131619474 362.844