LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme19042g00001	ATGAAAACTGAACAGGGAACGAGGGCAGCAACACCAGGCGATGGTGCGGGGAACAGAAACAATCCATTTTCATCGCAAAATCCAAGTCCTCTTTCATCATCATTTCCAAGTCCAATCCCATCCTACCAAGTTAGCCCTTCTTCCTCTTCATTTCCGAGCCCGTCTCGTATGGATGCAAACAACAGCGCATCAAATCTCTTTCCATACGGTCGTACTGTGTTCCCCAACATGTGTCTCCCACCTTTAAGAATATCAAACAGCGCACCTGTGACGCCTCCCATCTCATCACCAACCTCAAGAAATCCCAAACCCATGATTCCCACATGGGAATCAATCGCCAAAGCATCCGCTTCATCGTTCAATCACCCTCTCTTTGCAGCTTCTGCACCCACTAGCCCATCGCACCGTCACCTTTATGCACCGCCTACTATACCTGAATGTGACGAGTCTGATACTTCTACTGTTGAGTCTGGCCAGTGGTTGAACTTTCAAGCCTTTGCAAATGCTGCTAAATCAGTTTCTCCTACATTGAACTTTATGAAACCTGTAATCAATGAGCAGCATAACATGGTGCCTGATACTGATAGCAGAATGCAAGAGATGAGGATTTCAGAGCCAGAGTTTGGAGTGCAGGTGGTGAAGCCTTGGGTTGGGGAAAGGATTCATGAAGTGGGTTTGGATGATTTGGAGCTTACTCTTGGAAATGGAAAGGCTCCCAGTTAA	723	0.4689	MKTEQGTRAATPGDGAGNRNNPFSSQNPSPLSSSFPSPIPSYQVSPSSSSFPSPSRMDANNSASNLFPYGRTVFPNMCLPPLRISNSAPVTPPISSPTSRNPKPMIPTWESIAKASASSFNHPLFAASAPTSPSHRHLYAPPTIPECDESDTSTVESGQWLNFQAFANAAKSVSPTLNFMKPVINEQHNMVPDTDSRMQEMRISEPEFGVQVVKPWVGERIHEVGLDDLELTLGNGKAPS	240

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme19042g00001	240	PANTHER	BES1/BZR1 HOMOLOG PROTEIN 3-RELATED	24	237	IPR033264	GO:0003700\|GO:0006351\|GO:0009742
	Trme19042g00001	240	MobiDBLite	consensus disorder prediction	1	59	-	-
	Trme19042g00001	240	MobiDBLite	consensus disorder prediction	17	59	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme19042g00001	Trme-Chr19042	95	817	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme19042g00001	12	238	BZR Transcription Factor Family	AT1G75080	57.787	1.51e-69	215

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	BES1	Trme19042g00001		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme19042g00001	K14503		-	gmx:100803869	290.426