Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme190256g00001 GGTGCTACCGCAGTTGAAGATAAACTACAAGACGGGGTTCCTGAATGCATTGACAAACTAGCACAGGCCGGGATTAAGTTATGGGTATTGACCGGTGATAAAATGGAGACAGCGATTAATATTGGATTTGCTTGTAGTTTGCTTAGACAAGGAATGAAACAAATTATAATTAATTCAGATACTCCTGAAAACAAAGCGCTCGAGAAAATGGAGGACAAATCTGCTGCTGAAGCG 234 0.4103 GATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIINSDTPENKALEKMEDKSAAEA 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme190256g00001 78 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 69 - -
Trme190256g00001 78 Gene3D - 1 78 IPR023214 -
Trme190256g00001 78 SUPERFAMILY HAD-like 2 53 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme190256g00001 Trme-Chr190256 20 456 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme190256g00001 1 77 Primary Pumps ATPases AT1G13210 83.117 5.98e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme190256g00001 K01530 - gmx:100796405 150.984