Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18968g00001 CCAGTGGATACTAAAGAAGCAGCGTACGATGACGTTTTACCGAATGGAACTTTAGTTAAGAAAGGGTGGAGACTGACGTATCATGTATACGCTATGGGAAGGTCTGAGAAGATATGGGGATCTGATTGGGCTGAGTTTAGACCCGAGAGGTGGTTGAGTCTGGATGAGGATGGGAAGTGGAGCTTTGTTGGGATGGATATTTATAATTATCCAGTTTTTCAGGCTGGACCCAGGGTCTGTATAGGGAAGGAAATGGCATTCTTGCAGATGAAGAGGGTGGTTGCCGGGATTATGAGACAATTTAGGGTGGTTCCGACGATGGTTGAAGGGGTTGAGCCGGAGTACACTGCGTATCTTACCTCTTTAATGAAAGGTGGCTTCCCCGTAAAGATTGAGAAGCGTAGCCACACATAA 414 0.4662 PVDTKEAAYDDVLPNGTLVKKGWRLTYHVYAMGRSEKIWGSDWAEFRPERWLSLDEDGKWSFVGMDIYNYPVFQAGPRVCIGKEMAFLQMKRVVAGIMRQFRVVPTMVEGVEPEYTAYLTSLMKGGFPVKIEKRSHT 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18968g00001 137 Gene3D Cytochrome P450 1 137 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme18968g00001 137 SUPERFAMILY Cytochrome P450 5 134 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme18968g00001 137 Pfam Cytochrome P450 7 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme18968g00001 137 PANTHER CYTOCHROME P450 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme18968g00001 Trme-Chr18968 976 1389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18968g00001 3 136 Cytochrome P450 AT3G48520 52.206 1.21e-39 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18968g00001 K20769 K20768 ag:AAG33645 251.136