Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1894g00001 ATGATGGAGAAGCTGAAAATTCTCAATCTTAGTCATTCTCGTTATCTGACACAGACCCCTGACTTTTCATACTTGCCTAATCTTGAAAAGCTAGTGCTCAAAGATTGTCCTAGGTTGTCTAAGGTTTCCCATAGCATTGGACATCTCAATAAAGTTCTTCTGATAAATTTGAAAGACTGCATTAGCCTTTATAACCTTCCTAGAAACATCTATACGTTGAAATCTTTGAAAACTCTCATTCTATCTGGATGTTTAATGATTGACAAATTGGACGAGGACTTTGAACAGATGGAATCTTTAACCACTCTGATGGCAGATAACACAGCTATAACAGAAGTGCCTTTTTCAGTAGTAAGGTCAAAAAGCATTGGATATATTTCTTTGTGTGGATATGAAGGATCCTCACGTGATGTGTTTCCTTCTATCATTTGGTCTTGGATGTCACCAATAAATAATCTCTCACTCCCTGTTCAAACAGTTGCTGGCATGTCATCCCTTGTTTCATTAGGTGCATCAAGTAGCAGTTCCCACAATCTATCATCTATTACCATTCGAAAGCTTCAAAGACTTTGGCAAGAGTGTGGATCAGAACTTCAACTTTCACAAGACAAAACAAGAATTTTGAATGCTTTAAGTGCAACAAATTCTAAGAAATCGGAATATTTAACTGGAACTACATCTCAAGTATCAGATGCGAAGACTTCAATGTTAATTGAACAGCACAGTCAAGTGCACGTTTCAACATCAAGAAATTCCACGAAATCTCTTATAATTCAAATGGGAGTGAATTGCGTAATAACCAACATTCTGAAAGAGAGGATCATACAGAATTTGACTGTCGATGGGTGTGGTAGTTTTTTGCTCCCCGGTGATAACTTCCCAGATTGGTTAACTTTCAATTGCGAAGGTTCTTCTGTAATTTTTGGAGTCCCTTATGTGGAAGGGCGTAATTTGAAGACAATTATGTGCATTGTGTATTCTTTAAGCCCAGATTGCATAACATCAGATGGCCTTAAAAATGTGTTGGTGATTAATCACACAAAGACCACCATTCAACTCTATAAGAAAGAGGTGTTAGCCTCCTTTGAAAATGAGGACTGGCAGAGAGTACTATCAAATATGGAACCCGGTGACAAAGTGGAGATTGTTGTTTATGGGAACGGTTTCATTGTGTTGAAGACAGCAGTTTATCTCATATATGATGGACCAATTGGCGAAAAAATAGTCAAATGTCATGCACCAAATAAAAATGTTCTTGCTGGTAGTGGAGATGAAACTGAATGCGCTTACAAGAAGAGAGATTCAAAGGATACCTTCTGGGCTAAAATGACAGACAATCTACAGTTTCAAAGTGATGTTGCTTGGGATCTTGGGTTCACAGAAGTCCAACTTGAGCTTGATTTTGAAGCCTTTATCCTAATGCTTTAA 1428 0.3768 MMEKLKILNLSHSRYLTQTPDFSYLPNLEKLVLKDCPRLSKVSHSIGHLNKVLLINLKDCISLYNLPRNIYTLKSLKTLILSGCLMIDKLDEDFEQMESLTTLMADNTAITEVPFSVVRSKSIGYISLCGYEGSSRDVFPSIIWSWMSPINNLSLPVQTVAGMSSLVSLGASSSSSHNLSSITIRKLQRLWQECGSELQLSQDKTRILNALSATNSKKSEYLTGTTSQVSDAKTSMLIEQHSQVHVSTSRNSTKSLIIQMGVNCVITNILKERIIQNLTVDGCGSFLLPGDNFPDWLTFNCEGSSVIFGVPYVEGRNLKTIMCIVYSLSPDCITSDGLKNVLVINHTKTTIQLYKKEVLASFENEDWQRVLSNMEPGDKVEIVVYGNGFIVLKTAVYLIYDGPIGEKIVKCHAPNKNVLAGSGDETECAYKKRDSKDTFWAKMTDNLQFQSDVAWDLGFTEVQLELDFEAFILML 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1894g00001 475 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 2 212 - -
Trme1894g00001 475 SUPERFAMILY L domain-like 3 189 - -
Trme1894g00001 475 Gene3D Ribonuclease Inhibitor 1 248 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1894g00001 Trme-Chr1894 138 2285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1894g00001 2 117 WRKY Transcription Factor Family AT4G12020 33.621 1.26e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1894g00001 - - lja:Lj0g3v0160149.1 548.895