Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18943g00001 ATGAACAACCCTAATGCTAACTCAGAGGTGTCTGCCTTGCTTGGTCGTATTCCATCTGCTGTTGGTTACCAACCAACATTGTCTACCGATCTTGGAGGTCTTCAAGAGCGTATTACAACCACCAAGAAGGGTTCAATTACCTCTGTCCAAGCTATCTATGTGCCTGCCGATGACTTGACAGATCCTGCTCCTGCTACCACATTTGCTCACTTGGATGCTACAACAGTGTTGTCAAGACAGATCTCTGAGCTTGGTATCTATCCTGCTGTTGATCCATTGGATTCAACATCTCGTATGCTTTCTCCACTTATTTTGGGTGATGAGCACTACCAAACTGCTCGTGGTGTACAACAAGTTCTTCAAAATTACAAGAATCTTCAGGATATCATTGCTATTTTAGGAATGGATGAGCTCAGTGAAGATGATAAATTGACTGTTGCACGTGCCCGTAAAATTCAACGGTTCTTAAGCCAGCCTTTCCATGTGGCTGAAGTTTTCACTGGTGCCCCAGGCAAATATGTTGAGTTGAAGGAGAACACTCAAAGTTTCCAG 552 0.4384 MNNPNANSEVSALLGRIPSAVGYQPTLSTDLGGLQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPLILGDEHYQTARGVQQVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGAPGKYVELKENTQSFQ 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18943g00001 184 Gene3D - 3 99 IPR027417 -
Trme18943g00001 184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 103 IPR027417 -
Trme18943g00001 184 ProSitePatterns ATP synthase alpha and beta subunits signature. 88 97 IPR020003 GO:0005524
Trme18943g00001 184 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 5 97 IPR000194 GO:0005524
Trme18943g00001 184 PANTHER ATP SYNTHASE 6 184 - -
Trme18943g00001 184 FunFam ATP synthase subunit beta 100 184 - -
Trme18943g00001 184 CDD ATP-synt_F1_beta_C 104 184 - -
Trme18943g00001 184 Gene3D - 100 184 IPR024034 -
Trme18943g00001 184 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 100 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme18943g00001 Trme-Chr18943 358 1095 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18943g00001 5 158 Primary Pumps ATPases(2) AT4G38510 31.677 2.34e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18943g00001 K02133 - pop:7459801 336.265