Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme189437g00001 GAGGCAGAGAGAATAACTCAGTGTCAAGGGCGTGTGTTTTGTTTAGAAGATGAACCTGGGGTGCATAGGGTATGGTTACCAGATGTAGAGTCTCCAGGACTTGCCATGTCAAGGGCTTTTGGTGATTATTGTATTAAACAATATGGTCTTATTTCAGTGCCTGAGGTAACTCAAAGGAATATAAGCAGTAATGATCAGTTTGTTGTGCTTGCTTCTGATGGGGTAAGGTGTCCTATCCTATAA 243 0.4198 EAERITQCQGRVFCLEDEPGVHRVWLPDVESPGLAMSRAFGDYCIKQYGLISVPEVTQRNISSNDQFVVLASDGVRCPIL 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme189437g00001 80 Pfam Protein phosphatase 2C 1 75 IPR001932 -
Trme189437g00001 80 SUPERFAMILY PP2C-like 1 75 IPR036457 -
Trme189437g00001 80 Gene3D - 1 77 IPR036457 -
Trme189437g00001 80 ProSiteProfiles PPM-type phosphatase domain profile. 1 80 IPR001932 -
Trme189437g00001 80 PANTHER PROTEIN PHOSPHATASE 1 75 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme189437g00001 Trme-Chr189437 138 380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme189437g00001 1 75 PP2C-type Phosphatase Gene Family AT5G27930 78.667 1.17e-43 141