Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme189355g00001 GGAGGACTTTTCCGTAGTGTAACTGTGACGCCTTCAAAGAGATTAAAAGGAAAGAAGAATCGTAAGATTAATGTTACTACTGACAGCAAAAATCTATCGCTTGGTTCCTTGGAAGAGTTGTCCAAGGCTCGACGTTCAGTGCTTGATCCTCCTTGGGAAGGACAAAACTTGATTCCTGGTGATGTTTTGTGGTCTGATCCTTCAAAAACGCCTGGTCTTTCTCCAAACAAAGAGAGAGGCATTGGCTTGGTTTGGGGTCCCGACGTTACTGAAGCATTTTTGAAGAAGTACCAATTTAAGCTTGAAATTTTTGCTTGA 318 0.4214 GGLFRSVTVTPSKRLKGKKNRKINVTTDSKNLSLGSLEELSKARRSVLDPPWEGQNLIPGDVLWSDPSKTPGLSPNKERGIGLVWGPDVTEAFLKKYQFKLEIFA 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme189355g00001 105 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 1 101 - -
Trme189355g00001 105 Gene3D - 16 105 IPR029052 -
Trme189355g00001 105 MobiDBLite consensus disorder prediction 1 20 - -
Trme189355g00001 105 Pfam Calcineurin-like phosphoesterase 32 104 IPR004843 GO:0016787
Trme189355g00001 105 SUPERFAMILY Metallo-dependent phosphatases 48 104 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme189355g00001 Trme-Chr189355 1 409 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme189355g00001 1 101 Calmodulin-binding Proteins AT5G63870 65.686 6.45e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme189355g00001 K04460 - gmx:100810695 184.882