Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18919g00001 ATGGGCTTGGCTTTTAACCATGCTGTTGTTGATGGAACTTCCACATGGCACTTCATGACTTCATGGGCCGAAGAATGCAGCAGTGCACCCCCCACAACACCCCGACCATTCCTAGAACGGACCAAGTCCCGAAACACACGCGTAAAGCTTGACCTCTCCCTACCTGAGCCCAAAAGCCCATCAGCCAATGGTGAGGCAAAGCTCGAGCCCGAAGGCCCTCCTCCATCAGCCAATGGTGAGGCAAAGCCTGAGCCTGAAGGCCCACCACCATCAGCCAATGGTGGGGCAAAGCCCGTACTTAGGGAAAAGATCTTCAAATTTTCCGAGTCAGCCATCGACAAAATCAAGTCAACAGTCAACCAAACTCTTCCATTAGAAGGTTCAAAACCATTCTCAACATTCCAGTCTCTCTCCGCTCATATTTGGCGTCATGTGACCCTTGCACGTGACCTAAAACCTGAAGAATATACAGTGTACACCGTCTTTGCAGACTGCCGAAAACGAGTGGACCCACCAATGCCAGAGGCGTACTTCGGTAACCTAATTCAAGCCATATTCACTGTCACCGCCGCAGGGCTTTTGTCGGCCCACCCACCACAATTCGGCGCTTCTTTGATCCAAAAGGCAATTGAATCTCATGATGCTAATGCTATTGATGGACGTAACAAAGAGTGGGAGAGTGAACCCAAGATTTTTCAATTCAAAGATGCTGGAGTGAATTGTGTGGCAGTTGGAAGTTCACCAAGGTTTAAGGTTTATGACATTGATTTTGGATGGGGAACCCCAGAGATTGTGAGGAGTGGGACTAATAACAAATTTGATGGAATGATTTATTTGTATCCTGGCAAGAGTGGAGGTAGGAGCATTGATGTTGAGCTAACATTGGAGCCAGAGGCCATGGGAAGGTTGGAGCAAGATAAGGAATTTCTTATGGAATTATAA 942 0.4777 MGLAFNHAVVDGTSTWHFMTSWAEECSSAPPTTPRPFLERTKSRNTRVKLDLSLPEPKSPSANGEAKLEPEGPPPSANGEAKPEPEGPPPSANGGAKPVLREKIFKFSESAIDKIKSTVNQTLPLEGSKPFSTFQSLSAHIWRHVTLARDLKPEEYTVYTVFADCRKRVDPPMPEAYFGNLIQAIFTVTAAGLLSAHPPQFGASLIQKAIESHDANAIDGRNKEWESEPKIFQFKDAGVNCVAVGSSPRFKVYDIDFGWGTPEIVRSGTNNKFDGMIYLYPGKSGGRSIDVELTLEPEAMGRLEQDKEFLMEL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme18919g00001 313 MobiDBLite consensus disorder prediction 26 97 - -
Trme18919g00001 313 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 310 - -
Trme18919g00001 313 FunFam Tryptamine hydroxycinnamoyl transferase 88 307 - -
Trme18919g00001 313 Pfam Transferase family 1 309 - -
Trme18919g00001 313 MobiDBLite consensus disorder prediction 76 92 - -
Trme18919g00001 313 Gene3D - 77 306 IPR023213 -
Trme18919g00001 313 Gene3D - 1 53 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme18919g00001 Trme-Chr18919 8 949 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18919g00001 1 313 Monolignol Biosynthesis Gene Families AT5G48930 25.552 4.33e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18919g00001 K19747 - gmx:100790669 479.174