Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme189053g00001 AAGAGACGCCGTGCTACCAAGAAGCCATACTCCAGGTCCATTGTTGGTGCTACCCTGGAAGTAATTCAGAAGAAAAGAACTGAGAAGCCTGAAGTTAGAGATGCAGCTAGGGAAGCTGCTCTTCGTGAAATTAAAGAGAGGATTAAGAAAACAAAGGATGAGAAGAAAGCCAAGAAAGCAGAAGTAGCATCTAAGGCACAGAAATCCGGCAAAGGGAATGTTCAGAAAGGTGCTTTGCCCAAGGGTCCTAAAATTGGCGGTGGTGGCGGGAAACGCTGA 279 0.4659 KRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVASKAQKSGKGNVQKGALPKGPKIGGGGGKR 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme189053g00001 92 MobiDBLite consensus disorder prediction 47 65 - -
Trme189053g00001 92 Gene3D - 1 69 - -
Trme189053g00001 92 Coils Coil 41 68 - -
Trme189053g00001 92 MobiDBLite consensus disorder prediction 47 92 - -
Trme189053g00001 92 PANTHER 60S RIBOSOMAL PROTEIN L24 1 84 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme189053g00001 Trme-Chr189053 8 459 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme189053g00001 1 85 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 83.721 1.46e-32 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme189053g00001 K02896 - twl:120012240 98.2117