Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme188543g00001 ATGTACATGCAGACTTATGCGCCTACAACATTGGCCGCAGCTCGAGACTTTTGGACATTGAGATACACTACTAGTTTGGAAGATGGAAGTCTTGTGATATGTGAGAGATCATTGAATGCTGCAACCGGTGGTCCTCCAGGGCCTTCTTCGACGAATTTCGTGAGAGCTGAAATGCTTCCCAGTGGATTTCTAATTCGAC 199 0.4623 MYMQTYAPTTLAAARDFWTLRYTTSLEDGSLVICERSLNAATGGPPGPSSTNFVRAEMLPSGFLIR 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme188543g00001 66 Pfam START domain 1 66 IPR002913 GO:0008289
Trme188543g00001 66 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 66 IPR044830 GO:0003700
Trme188543g00001 66 Gene3D - 1 66 IPR023393 -
Trme188543g00001 66 ProSiteProfiles START domain profile. 1 66 IPR002913 GO:0008289
Trme188543g00001 66 SUPERFAMILY Bet v1-like 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme188543g00001 Trme-Chr188543 1 430 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme188543g00001 1 66 Homeobox Transcription Factor Family AT2G34710 80.303 2.67e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme188543g00001 K09338 - gmx:100807428 125.176