Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trme18845g00001 ATGCAGCAAATTGTTGAGGATGTTTTGGCAAAACTAGACAGCACATTTTTGTCTATTACCGAATTTCCAGTTGGATTGGAATCTCGTGTACGAAATGTGACTGACGTTATTGAAAACCAACTGAAGAAAGTTTGTGTGATAGGAATATGGGGAATGGGCGGGTCTGGTAAAACAACCACGGCTAAAGCTGTATACAATCGAATTCACCGCAAATTTGTCGATAGAAGTTTTGTTGAAAATGTTAGAGAAGTATGTGAAAAGGAAAATAGAGGGATTATTCATTTACAACAACAACTTCTTTCAGATATCCTGAAACAGAAGAAGAAAATACACAGCGTTGTGTTAGGAACAACTAAGATTGAGAAAATATTTCGGGGGAAAAAGGTACTTGTTGTACTTGATGATGTGGCCACATTTGAACAGTTAAAATCGCTGTGTGGAAATCCTGAATTGTTTTGTCCGGGAAGTGTACTAATTGTCACAACTAGAGATCTACGCCTACTTAATTTATTTAAGGTGGACTATGTATGTACAATGAAGGAAATGGACGAAAATGAGTCCCTTGAGCTTTTCAGTTGGCATGCTTTTAGACAACCAAGTCCAATAAATGACTTCTGTGAACTCTCAAGGAACGTAGTTACTTATTGTGGAGGATTACCGGTTGCTCTTGAAGTCCTTGGTTCTTACTTATATGAGAGGAAAAAACAAGAATGGAAAAGTGTACTCTTGAAATTAGAGAGAATTCCGAATGATCAAGTGCAAGAGAAACTGAGAATAAGCTATGATGGTTTAAAGGATGACATGGAAAAGGACATGTTTCTTGACATATGTTGTTTCTTTATCGGCAAGGAGAGGGTTGATGTTACAGAGATACTAAATGGTTGTGGACTTCATGCAGATATTGGAATAACTGTCCTTGTAGAGCGGAGCCTTGTCAAAATTGAAAAGAATAACA 955 0.3728 MQQIVEDVLAKLDSTFLSITEFPVGLESRVRNVTDVIENQLKKVCVIGIWGMGGSGKTTTAKAVYNRIHRKFVDRSFVENVREVCEKENRGIIHLQQQLLSDILKQKKKIHSVVLGTTKIEKIFRGKKVLVVLDDVATFEQLKSLCGNPELFCPGSVLIVTTRDLRLLNLFKVDYVCTMKEMDENESLELFSWHAFRQPSPINDFCELSRNVVTYCGGLPVALEVLGSYLYERKKQEWKSVLLKLERIPNDQVQEKLRISYDGLKDDMEKDMFLDICCFFIGKERVDVTEILNGCGLHADIGITVLVERSLVKIEKNN 318
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trme18845g00001 318 PRINTS Disease resistance protein signature 46 61 - -
Trme18845g00001 318 PRINTS Disease resistance protein signature 216 230 - -
Trme18845g00001 318 PRINTS Disease resistance protein signature 123 137 - -
Trme18845g00001 318 Gene3D - 12 176 IPR027417 -
Trme18845g00001 318 Gene3D - 181 265 IPR042197 -
Trme18845g00001 318 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 314 IPR044974 GO:0006952
Trme18845g00001 318 Pfam NB-ARC domain 35 255 IPR002182 GO:0043531
Trme18845g00001 318 FunFam Disease resistance protein (TIR-NBS-LRR class) 183 265 - -
Trme18845g00001 318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 276 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trme18845g00001 Trme-Chr18845 438 1392 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme18845g00001 24 317 WRKY Transcription Factor Family AT5G45050 33.559 2.18e-43 157
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme18845g00001 - - cam:101511388 504.597