Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme188298g00001 TCTGAAGCAACTGGAGATAGGCTTAAGGAGGCTCAACATATAAACAAATCACTATCGGCGCTTGGAGATGTTATATTTGCTCTGGCTCAAAAGAGCCCGCATGTGCCATATAGAAACAGTAAATTGACTCAACTCCTTCAGAGTTCGTTAGGTGGTCAAGCAAAAACCCTTATGTTTGTACAACTTAATCCTGATGTTGCTTCATACTCTGAAACTATAAGCACTTTGAAGTTTGCTGAAAGGGTTTCTGGTGTTGAGTTAGGCGCGGCTCGTAGCAACAAAGAGGGACGGGATGTGAGAGAACTAATGGAGCAG 315 0.4317 SEATGDRLKEAQHINKSLSALGDVIFALAQKSPHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVELGAARSNKEGRDVRELMEQ 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme188298g00001 105 Gene3D Kinesin motor domain 1 105 IPR036961 -
Trme188298g00001 105 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 104 IPR027640 GO:0003777|GO:0007018
Trme188298g00001 105 ProSiteProfiles Kinesin motor domain profile. 1 85 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme188298g00001 105 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 23 104 - -
Trme188298g00001 105 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 96 IPR027417 -
Trme188298g00001 105 SMART kinesin_4 1 93 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme188298g00001 105 Pfam Kinesin motor domain 3 83 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme188298g00001 Trme-Chr188298 15 460 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme188298g00001 1 85 Calmodulin-binding Proteins AT5G65930 56.471 1.01e-24 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme188298g00001 K10406 - gmx:100777089 185.267