Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme188294g00001 GTGAAGTGTGCTCAAGTACTCCTTGAGGCTGGAGCAAAAGTAGATGCTTTGGATAAGAACAAGAACACAGCTCTTCATTATGCAGCAGGTTATGGCAGGAAGGAATGTGTGGCCCTGCTCCTTGAAAACGGTGCTGCCGTTACTCTACAGAATATGGATGGGAAAACTCCTATAGATGTTGCTAAGCTAAACAATCAAGATGATGTCCTACAGCTGCTTGAGAAAGATGTTTTTCTGTAA 240 0.4333 VKCAQVLLEAGAKVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNNQDDVLQLLEKDVFL 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme188294g00001 79 FunFam Ankyrin repeat domain-containing protein 2 25 76 - -
Trme188294g00001 79 Pfam Ankyrin repeats (many copies) 7 61 IPR002110 GO:0005515
Trme188294g00001 79 ProSiteProfiles Ankyrin repeat profile. 20 52 IPR002110 GO:0005515
Trme188294g00001 79 SUPERFAMILY Ankyrin repeat 2 74 IPR036770 -
Trme188294g00001 79 Gene3D - 1 77 IPR036770 -
Trme188294g00001 79 SMART ANK_2a 20 49 IPR002110 GO:0005515
Trme188294g00001 79 ProSiteProfiles Ankyrin repeat region circular profile. 20 51 - -
Trme188294g00001 79 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 2 75 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme188294g00001 7 75 MAP Kinase Kinase Kinase AT3G58760 43.478 1.64e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme188294g00001 - - cam:101510709 155.992