Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme188087g00001 ATGTCGAAAAACATTCCAACAAAATGGAAAGGAAAATGTGAAATAGGACAAGATTTCAACACTTCAATGTGTAACTTGAAACTAATTGGTGCTAGATATTTCAACAAAGGTGTAATTGCATCAAAACCAAATGTCAAAATCAGTATGAACTCGCCTCGAGACACACAAGGCCATGGAAGTCACACATCTTCGACAGTTGCCGGTAACTATGTCAATGATGCATCATATTTTGGTTATGCTAAAGGTGTAGCTAGAG 256 0.3711 MSKNIPTKWKGKCEIGQDFNTSMCNLKLIGARYFNKGVIASKPNVKISMNSPRDTQGHGSHTSSTVAGNYVNDASYFGYAKGVAR 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme188087g00001 85 ProSiteProfiles Serine proteases, subtilase domain profile. 1 85 - -
Trme188087g00001 85 SUPERFAMILY Subtilisin-like 43 83 IPR036852 GO:0004252|GO:0006508
Trme188087g00001 85 Gene3D Peptidase S8/S53 domain 3 85 IPR036852 GO:0004252|GO:0006508
Trme188087g00001 85 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 85 IPR045051 -
Trme188087g00001 85 MobiDBLite consensus disorder prediction 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme188087g00001 Trme-Chr188087 45 300 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme188087g00001 4 85 Subtilisin-like Serine Gene Family AT2G05920 52.941 2.58e-24 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme188087g00001 - - qsa:O6P43_007730 152.91